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	<title>Comments for MacVector talk</title>
	<atom:link href="http://macvector.com/blog/comments/feed/" rel="self" type="application/rss+xml" />
	<link>http://macvector.com/blog</link>
	<description>General musings from the MacVector team about sequence analysis, molecular biology, the Mac in general and of course your favorite sequence analysis app for the Mac!</description>
	<lastBuildDate>Fri, 09 Sep 2011 12:48:07 +0000</lastBuildDate>
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	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Emre</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-17216</link>
		<dc:creator>Emre</dc:creator>
		<pubDate>Fri, 09 Sep 2011 12:48:07 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-17216</guid>
		<description>Dear Chris,

Neither any of the files that you uploaded recently nor the original RE files that come wtih MacVector has attP sequences on them. attB 1-4 are there but not the attP except for attP5. And attL4 is not there either. Is there a specific reason for this?

Thanks

Emre</description>
		<content:encoded><![CDATA[<p>Dear Chris,</p>
<p>Neither any of the files that you uploaded recently nor the original RE files that come wtih MacVector has attP sequences on them. attB 1-4 are there but not the attP except for attP5. And attL4 is not there either. Is there a specific reason for this?</p>
<p>Thanks</p>
<p>Emre</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Chris</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16683</link>
		<dc:creator>Chris</dc:creator>
		<pubDate>Mon, 15 Aug 2011 13:14:44 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16683</guid>
		<description>Here&#039;s an updated &lt;a href=&quot;http://www.macvector.com/Downloads/NewGatewayTOPO.renz.zip&quot; rel=&quot;nofollow&quot;&gt;Gateway file&lt;/a&gt;</description>
		<content:encoded><![CDATA[<p>Here&#8217;s an updated <a href="http://www.macvector.com/Downloads/NewGatewayTOPO.renz.zip" rel="nofollow">Gateway file</a></p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Chris</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16663</link>
		<dc:creator>Chris</dc:creator>
		<pubDate>Sun, 14 Aug 2011 14:29:54 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16663</guid>
		<description>Hi Jason.  Thanks for your comment.  There was a bug in the file that caused the reverse complement site to not be recognised. That&#039;s now fixed.  I&#039;ll upload the file shortly</description>
		<content:encoded><![CDATA[<p>Hi Jason.  Thanks for your comment.  There was a bug in the file that caused the reverse complement site to not be recognised. That&#8217;s now fixed.  I&#8217;ll upload the file shortly</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Jason</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16605</link>
		<dc:creator>Jason</dc:creator>
		<pubDate>Thu, 11 Aug 2011 18:53:57 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16605</guid>
		<description>I am having problems with MacVector not recognizing attB2 sites all the time. If cut this sequence:
GGGGACCACTTTGTACAAGAAAGCTGGGTN
it shows an attB2 site. If I then &quot;reverse complement&quot; the same sequence, it no longer shows an attB2 site.

Any suggestons</description>
		<content:encoded><![CDATA[<p>I am having problems with MacVector not recognizing attB2 sites all the time. If cut this sequence:<br />
GGGGACCACTTTGTACAAGAAAGCTGGGTN<br />
it shows an attB2 site. If I then &#8220;reverse complement&#8221; the same sequence, it no longer shows an attB2 site.</p>
<p>Any suggestons</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Chris</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16555</link>
		<dc:creator>Chris</dc:creator>
		<pubDate>Mon, 08 Aug 2011 14:22:37 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16555</guid>
		<description>Hi Emre,

it sounds like that file has lost its resource fork. Try using this &lt;a href=&quot;http://www.macvector.com/Downloads/CommonEnzymes+TOPO_GatewayJuly2011.renz.zip&quot; rel=&quot;nofollow&quot;&gt;file&lt;/a&gt;.</description>
		<content:encoded><![CDATA[<p>Hi Emre,</p>
<p>it sounds like that file has lost its resource fork. Try using this <a href="http://www.macvector.com/Downloads/CommonEnzymes+TOPO_GatewayJuly2011.renz.zip" rel="nofollow">file</a>.</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Emre</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16199</link>
		<dc:creator>Emre</dc:creator>
		<pubDate>Wed, 20 Jul 2011 13:02:34 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16199</guid>
		<description>Hello,

Thanks for the quick response.

I downloaded the file and placed it in the &quot;Restriction Enyzme&quot; folder. While it is possible to make a Restriction Enzyme analysis using the updated file, the files is grayed out when I try to select it in the Automatic RE Analysis feature under Map View. The same is true with the other file you provided previously. Any tricks that I can try?

Thanks</description>
		<content:encoded><![CDATA[<p>Hello,</p>
<p>Thanks for the quick response.</p>
<p>I downloaded the file and placed it in the &#8220;Restriction Enyzme&#8221; folder. While it is possible to make a Restriction Enzyme analysis using the updated file, the files is grayed out when I try to select it in the Automatic RE Analysis feature under Map View. The same is true with the other file you provided previously. Any tricks that I can try?</p>
<p>Thanks</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Kevin Kendall</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16198</link>
		<dc:creator>Kevin Kendall</dc:creator>
		<pubDate>Wed, 20 Jul 2011 13:01:45 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16198</guid>
		<description>You can select multiple sites for copying by drag-selecting, you just can’t command-select or shift-select in MacVector 12 and earlier. As it happens, we’ve rewritten the Restriction Editor window for our upcoming MacVector 12.5 release and it now uses a standard OS X Cocoa TableView, so you get all the usual selection behavior you’d expect in a normal list.</description>
		<content:encoded><![CDATA[<p>You can select multiple sites for copying by drag-selecting, you just can’t command-select or shift-select in MacVector 12 and earlier. As it happens, we’ve rewritten the Restriction Editor window for our upcoming MacVector 12.5 release and it now uses a standard OS X Cocoa TableView, so you get all the usual selection behavior you’d expect in a normal list.</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by admin</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16196</link>
		<dc:creator>admin</dc:creator>
		<pubDate>Wed, 20 Jul 2011 12:40:52 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16196</guid>
		<description>Hi Nils,

here you &lt;a href=&quot;http://www.macvector.com/Downloads/CommonEnzymes+TOPO_GatewayJuly2011.renz.zip&quot; rel=&quot;nofollow&quot;&gt;go&lt;/a&gt;.

Incidentally you can copy and paste single sites between RE files as long as they are unlocked.</description>
		<content:encoded><![CDATA[<p>Hi Nils,</p>
<p>here you <a href="http://www.macvector.com/Downloads/CommonEnzymes+TOPO_GatewayJuly2011.renz.zip" rel="nofollow">go</a>.</p>
<p>Incidentally you can copy and paste single sites between RE files as long as they are unlocked.</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Emre</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-16195</link>
		<dc:creator>Emre</dc:creator>
		<pubDate>Wed, 20 Jul 2011 12:28:44 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-16195</guid>
		<description>Hi Chris,

Is there an easy way to integrate this updated Gateway file to the common enzymes file? Doing it one by one would be tedious.

Thanks</description>
		<content:encoded><![CDATA[<p>Hi Chris,</p>
<p>Is there an easy way to integrate this updated Gateway file to the common enzymes file? Doing it one by one would be tedious.</p>
<p>Thanks</p>
]]></content:encoded>
	</item>
	<item>
		<title>Comment on Gateway and TOPO Cloning with MacVector by Chris</title>
		<link>http://macvector.com/blog/2009/11/gateway-and-topo-cloning-with-macvector/comment-page-1/#comment-15289</link>
		<dc:creator>Chris</dc:creator>
		<pubDate>Wed, 08 Jun 2011 07:50:42 +0000</pubDate>
		<guid isPermaLink="false">http://macvector.com/blog/?p=208#comment-15289</guid>
		<description>Hi Nils,

there&#039;s an updated &quot;Gateway&quot; file available for &lt;a href=&quot;http://www.macvector.com/Downloads/Gateway+TOPO.renz&quot; rel=&quot;nofollow&quot;&gt;download&lt;/a&gt;.
Get this then place it in your &quot;Restriction Enzyme&quot; folder.</description>
		<content:encoded><![CDATA[<p>Hi Nils,</p>
<p>there&#8217;s an updated &#8220;Gateway&#8221; file available for <a href="http://www.macvector.com/Downloads/Gateway+TOPO.renz" rel="nofollow">download</a>.<br />
Get this then place it in your &#8220;Restriction Enzyme&#8221; folder.</p>
]]></content:encoded>
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