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ASM2012: San Francisco
Read more: ASM2012: San FranciscoWe’ll be at the 112th ASM meeting in San Francisco this year from June 16 – 19, 2012. Come visit us if you are at the show. Our booth at the ASM will be 936. We’ll be demoing MacVector 12.6 which will be released about that date. You’ll also be able to pick up demo…
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Showing features as bases or a translation in a plasmid map
Read more: Showing features as bases or a translation in a plasmid mapEverybody has different tastes and giving everybody identical plasmid maps is unfair! So MacVector is designed to be as flexible as possible to allow you to make your maps look like YOU want then to look. In this theme was a recent change where appropriate features can be shown as residues when there is sufficient…
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Assembler: Using the coverage map of the Reference Contig editor to analyze your assembly
Read more: Assembler: Using the coverage map of the Reference Contig editor to analyze your assemblyThere are two main steps to creating a reference assembly. Mapping your reads against your reference sequence and then analysing the alignment for variations. Knowing the depth of reads, or coverage, of an alignment is important for both of these stages. A low average depth of coverage means that you have less confidence in the…
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Choosing the default application to open a file type
Read more: Choosing the default application to open a file typeSometimes you’ll find that when you double click on a document (for example a protein sequence) that it opens in the wrong application. Generally this has resulted from recently installing a new application that has registered itself as the default application that you normally use to open that document. This will overwrite your default application.…
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Using old subsequence files with MacVector
Read more: Using old subsequence files with MacVectorSometimes when a subsequence file, that has been created by an version of MacVector prior to MacVector 11, has been stored on a remote filesystem or has been emailed MacVector will refuse to open the file. Mac files are generally comprised of two pieces: A data fork and the resource fork. Prior to the release…
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MacVector 12.5 workshop at the University of Pennsylvania
Read more: MacVector 12.5 workshop at the University of PennsylvaniaIf you are a user of MacVector or have any interest in sequence analysis for molecular biologists then you may be interested to know that there’s a workshop about MacVector at the University of Pennsylvania this Thursday open to faculty, students and researchers. When: Thursday February 9th 9:30 to 11:00 Where: Blockley Hall, Room 1311…
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MacVector 12.5 workshop at Memorial Sloane Kettering Cancer Center
Read more: MacVector 12.5 workshop at Memorial Sloane Kettering Cancer CenterIf you are a user of MacVector or have any interest in sequence analysis for molecular biologists then you may be interested to know that there’s a workshop about MacVector at MSKCC this Wednesday open to MSKCC faculty, students and researchers. When: Wednesday February 8 from 11:00 to 12:30 Where: Room RRL B20 “Dr Kevin…
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MacVector 12.5 workshop at Rockefeller
Read more: MacVector 12.5 workshop at RockefellerIf you are a user of MacVector or have any interest in sequence analysis for molecular biologists then you may be interested to know that there’s two workshops about MacVector at The Rockefeller University this Tuesday open to all Rockefeller faculty, students and researchers. When: Tuesday. Feb. 7, 2012 at 10:00 – 11:30 and 1:00…
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Running old versions of MacVector on Lion.
Read more: Running old versions of MacVector on Lion.Only MacVector 9.5 and later versions will run on OS X 7 Lion. Apple started transitioning their processor architecture from PowerPC (PPC) to Intel’s x86 in 2006. The Macbook Pro and the iMac being the first Intel Macs. When they did so they gave Xcode (the OSX development environment) the ability to create Universal Binary…
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MacVector 12.5: Creating alignments with T-Coffee and Muscle
Read more: MacVector 12.5: Creating alignments with T-Coffee and MuscleWith MacVector 12.5 we’ve added additional multiple sequence alignment (MSA) algorithms. Muscle and T-coffee have been added to the Multiple Sequence Alignment editor complementing the existing ClustalW algorithm. We’ve wanted both of these for a while now and judging from the results of last year’s survey so have many users. Both T-Coffee and Muscle are…
