Importing Sequencher project files into MacVector

Assembler is a plugin for MacVector that provides comprehensive sequence assembly functionality. Assembler is fully integrated into MacVector and allows you to manage sequencing data with the familiar MacVector style. You can design primers directly on a contig or BLAST that contig to identify it. MacVector’s Assembly Project manager Like Sequencher, MacVector with Assembler has […]

Posted in Tips | Also tagged , , | Comments closed

Importing SnapGene files into MacVector

MacVector will directly import SnapGene DNA files. You just need to use FILE | OPEN or double click the file. This is very useful when downloading plasmid sequences from the wonderful Addgene plasmid repository. When you import a Snapgene file the appearance will be very similar. The colors of features will be the same as […]

Posted in Uncategorized | Also tagged , , | Comments closed

Opening Genbank or FASTA files with multiple sequences as individual sequences

Many sequence formats contain multiple concatenated sequence entries. For example FASTA and Genbank are two formats capable of storing multiple individual sequences. By default MacVector will treat such sequences as alignments and open them in the Multiple Sequence Alignment editor. Most users who want to open such a file do want to see an alignment. […]

Posted in Tips | Also tagged , , | Comments closed

How to import annotated GenBank sequences via copy and paste

While MacVector does have a built-in Entrez browser (Database > Internet Entrez Search) you can easily import GenBank formatted text into MacVector via a simple copy and paste approach. Many sequence-oriented web sites have the option of viewing sequences in GenBank format. This format always starts with the text LOCUS and finishes with two forward […]

Posted in Uncategorized | Also tagged , , , | Comments closed